2026-10-25
Native Tool License Affirmations
How Galaxy enforces tool agreements across submissions, nested workflows, and job creation
galaxyarchitectureapi
john@jmchilton.net %
ls -l slides/
Presentations
Slide decks from talks, presentations, and lectures.
2026-10-25
Exposing Step Parameters in the Simple Workflow Run Form
Issue and spike recap: set a few tool parameters at run time without the legacy expanded form
galaxyworkflowsusability
2026-10-12
I like Client Testing and Dislike Galaxy's Unit Tests
A short discussion about client testing, confidence, and the tests we want to maintain
galaxytestingdeveloper-experience
2026-08-27 Galaxy ML Lab Meeting
Foundry Q & A
Five follow-up questions from the Foundry Pattern talk, answered from the source
galaxybioinformaticsreproducibilityai
2026-08-13
The Foundry Pattern in One Minute
More Principled Skills for Agents and Humans, in four slides
galaxyreproducibilityai
2026-08-13 Galaxy ML Lab Meeting
The Foundry Pattern
More Principled Skills for Agents and Humans
galaxybioinformaticsreproducibilityai
2026-06-01 GCC 2026
The Galaxy Workflow Draft Format
A gxformat2 superset that makes under-determination a typed, checkable state
galaxyworkflowsai
2026-06-01 GCC 2026
Reproducibility in the Age of Agents
Galaxy doubles down on reproducibility to keep agent-assisted science trustworthy
galaxyreproducibilityworkflows
2025-12-04 Nekrutenko Lab Meeting
Claude & Galaxy
How @jmchilton uses Claude for developing Galaxy
aigalaxydeveloper-experience